Package: reluxr 0.1.1

reluxr: Deconvolute Luminescence Readings on Bacterial Culture Plates

Implements the deconvolution algorithm developed in Mauri, Vecchione, and Fritz (2019) which enables deconvolution of luminscence readings for experimental culture plates. {reluxr} provides functions for calculating the 'best' deconvolution matrix from a calibration plate, and enables usage of this calibration matrix (or one calculated previously) to adjust experimental values from a plate reader.

Authors:Brady Johnston [aut, cre]

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reluxr.pdf |reluxr.html✨
reluxr/json (API)

# Install 'reluxr' in R:
install.packages('reluxr', repos = c('https://bradyajohnston.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/bradyajohnston/reluxr/issues

On CRAN:

plate-readersynthetic-biology

2.00 score 2 stars 5 exports 41 dependencies

Last updated 2 years agofrom:dcc567456a. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 14 2024
R-4.5-winOKNov 14 2024
R-4.5-linuxOKNov 14 2024
R-4.4-winOKNov 14 2024
R-4.4-macOKNov 14 2024
R-4.3-winOKNov 14 2024
R-4.3-macOKNov 14 2024

Exports:is_well_idplate_read_tecanrl_adjust_platerl_calc_decon_matrixrl_plot_plate

Dependencies:clicolorspacecpp11dplyrfansifarvergenericsggplot2gluegtablehmsisobandjanitorlabelinglatticelifecyclelubridatemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigpurrrR6RColorBrewerrlangscalessnakecasestringistringrtibbletidyrtidyselecttimechangeutf8vctrsviridisLitewithr