{
  "_id": "6ad08373e2d863f662955419",
  "Package": "reluxr",
  "Title": "Deconvolute Luminescence Readings on Bacterial Culture Plates",
  "Version": "0.1.1",
  "Authors@R": "person(given = \"Brady\",\nfamily = \"Johnston\",\nrole = c(\"aut\", \"cre\"),\nemail = \"brady.johnston@me.com\",\ncomment = c(ORCID = \"0000-0001-6301-2269\"))",
  "Description": "Implements the deconvolution algorithm developed in Mauri,\nVecchione, and Fritz (2019) which enables deconvolution of\nluminscence readings for experimental culture plates. {reluxr}\nprovides functions for calculating the 'best' deconvolution\nmatrix from a calibration plate, and enables usage of this\ncalibration matrix (or one calculated previously) to adjust\nexperimental values from a plate reader.",
  "License": "MIT + file LICENSE",
  "Config/testthat/edition": "3",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.2.1",
  "URL": "https://github.com/bradyajohnston/reluxr",
  "BugReports": "https://github.com/bradyajohnston/reluxr/issues",
  "Repository": "https://bradyajohnston.r-universe.dev",
  "Date/Publication": "2023-03-16 07:51:49 UTC",
  "RemoteUrl": "https://github.com/bradyajohnston/reluxr",
  "RemoteRef": "HEAD",
  "RemoteSha": "dcc567456a372cb018856062110dc914583a67ce",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-15 07:00:32 UTC",
    "User": "root"
  },
  "Author": "Brady Johnston [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-6301-2269>)",
  "Maintainer": "Brady Johnston <brady.johnston@me.com>",
  "_user": "bradyajohnston",
  "_type": "src",
  "_file": "reluxr_0.1.1.tar.gz",
  "_fileid": "https://r2.ropensci.org/3dcf8cc5e82e44b64ac47ead24849bd849863100e1274d42605bb4628e6db47f",
  "_filesize": 3233125,
  "_sha256": "3dcf8cc5e82e44b64ac47ead24849bd849863100e1274d42605bb4628e6db47f",
  "_expires": "2027-01-23T07:40:33.000Z",
  "_created": "2026-10-15T07:00:32.000Z",
  "_published": "2026-10-15T07:40:35.699Z",
  "_buildurl": "https://github.com/r-universe/bradyajohnston/actions/runs/38695645966",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 116292402037,
      "time": 156,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11953934462"
    },
    {
      "job": 116292401877,
      "time": 161,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11953729554"
    },
    {
      "job": 116292401868,
      "time": 112,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11955556867"
    },
    {
      "job": 116292402020,
      "time": 119,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11956105929"
    },
    {
      "job": 116291613187,
      "time": 138,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11954163442"
    },
    {
      "job": 116292401866,
      "time": 118,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "11953659373"
    },
    {
      "job": 116292402039,
      "time": 97,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11953354823"
    },
    {
      "job": 116292401918,
      "time": 80,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11953619573"
    },
    {
      "job": 116292402090,
      "time": 94,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11954049036"
    }
  ],
  "_upstream": "https://github.com/bradyajohnston/reluxr",
  "_commit": {
    "id": "dcc567456a372cb018856062110dc914583a67ce",
    "author": "Brady Johnston <36021261+BradyAJohnston@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #2 from BradyAJohnston/errors\n\nAdd some more useful error messages for checking the presence of columns",
    "time": 1678953109
  },
  "_maintainer": {
    "name": "Brady Johnston",
    "email": "brady.johnston@me.com",
    "login": "bradyajohnston",
    "mastodon": "@bradyajohnston@aus.social",
    "bluesky": "@bradyajohnston.bsky.social",
    "orcid": "0000-0001-6301-2269",
    "twitter": "@bradyajohnston",
    "description": "Structural biologist interested in compelling visualisations of complex biological data.",
    "uuid": 36021261
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "cli",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "janitor",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "covr",
      "role": "Suggests"
    },
    {
      "package": "readxl",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "bradyajohnston",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_topics": [
    "plate-reader",
    "synthetic-biology"
  ],
  "_stars": 2,
  "_contributors": [
    {
      "user": "bradyajohnston",
      "count": 64,
      "uuid": 36021261
    }
  ],
  "_userbio": {
    "uuid": 36021261,
    "type": "user",
    "name": "Brady Johnston",
    "followers": 472,
    "description": "Structural biologist interested in compelling visualisations of complex biological data."
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/reluxr"
  },
  "_devurl": "https://github.com/bradyajohnston/reluxr",
  "_searchresults": 0,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/readme.html",
    "extra/readme.md",
    "extra/reluxr.html",
    "LICENSE"
  ],
  "_cranurl": false,
  "_exports": [
    "is_well_id",
    "plate_read_tecan",
    "rl_adjust_plate",
    "rl_calc_decon_matrix",
    "rl_plot_plate"
  ],
  "_help": [
    {
      "page": "dot-decon_vec",
      "title": "Deconvolute a Single Vector",
      "topics": [
        ".decon_vec"
      ]
    },
    {
      "page": "dot-deconvolute_multi_frame_matrix",
      "title": "Deconvolute a Multi-Frame Matrix",
      "topics": [
        ".deconvolute_multi_frame_matrix"
      ]
    },
    {
      "page": "dot-mat_calc_bleed",
      "title": "Calculate Bleed Through Matrix",
      "topics": [
        ".mat_calc_bleed"
      ]
    },
    {
      "page": "dot-mat_calc_deconvolution",
      "title": "Make Deconvolution Matrix From Bleed-Through Matrix",
      "topics": [
        ".mat_calc_deconvolution"
      ]
    },
    {
      "page": "dot-multi_frame_matrix_from_df",
      "title": "Create a multi-frame matrix from a dataframe.",
      "topics": [
        ".multi_frame_matrix_from_df"
      ]
    },
    {
      "page": "dot-multi_frame_matrix_to_vec",
      "title": "Convert a Multi-Frame Matrix to a Vector",
      "topics": [
        ".multi_frame_matrix_to_vec"
      ]
    },
    {
      "page": "df_arrange",
      "title": "Reorder a DatFrame",
      "topics": [
        "df_arrange"
      ]
    },
    {
      "page": "is_well_id",
      "title": "Logical test for well ID format.",
      "topics": [
        "is_well_id"
      ]
    },
    {
      "page": "plate_read_tecan",
      "title": "Read the output of Tecan Plate Readers",
      "topics": [
        "plate_read_tecan"
      ]
    },
    {
      "page": "rl_adjust_plate",
      "title": "Adjust Experimental Luminescent Data",
      "topics": [
        "rl_adjust_plate"
      ]
    },
    {
      "page": "rl_calc_decon_matrix",
      "title": "Calculate a Deconvolution Matrix",
      "topics": [
        "rl_calc_decon_matrix"
      ]
    },
    {
      "page": "rl_mat_decon_best",
      "title": "Calculate the Optimal Deconvolution Matrix",
      "topics": [
        "rl_mat_decon_best"
      ]
    },
    {
      "page": "rl_plot_plate",
      "title": "Plot a Plate-Layout of the Value Column",
      "topics": [
        "rl_plot_plate"
      ]
    }
  ],
  "_readme": "https://github.com/bradyajohnston/reluxr/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "dplyr",
    "farver",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "hms",
    "isoband",
    "janitor",
    "labeling",
    "lifecycle",
    "lubridate",
    "magrittr",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "RColorBrewer",
    "rlang",
    "S7",
    "scales",
    "snakecase",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "timechange",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_score": 2,
  "_indexed": true,
  "_nocasepkg": "reluxr",
  "_universes": [
    "bradyajohnston"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-10-15T07:03:04.000Z",
      "distro": "resolute",
      "commit": "dcc567456a372cb018856062110dc914583a67ce",
      "fileid": "https://r2.ropensci.org/7f00d2eb1db36f71cd4976efee681fc8a7f3718bc2a8ff90f8ee036104aed54d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bradyajohnston/actions/runs/38695645966"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-10-15T07:03:11.000Z",
      "distro": "resolute",
      "commit": "dcc567456a372cb018856062110dc914583a67ce",
      "fileid": "https://r2.ropensci.org/70683047a305f544270f5470e7997bb6a33368bdc6bba23f7d98158f25056003",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bradyajohnston/actions/runs/38695645966"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-10-15T07:37:16.000Z",
      "commit": "dcc567456a372cb018856062110dc914583a67ce",
      "fileid": "https://r2.ropensci.org/f096df288454a2a3d0104666d55ff58a835767fb1c738668c1f1c33277f399ae",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bradyajohnston/actions/runs/38695645966"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-10-15T07:39:34.000Z",
      "commit": "dcc567456a372cb018856062110dc914583a67ce",
      "fileid": "https://r2.ropensci.org/31e9d942bd614944d7180a289fe1b6ae70f4b16cf340df4b2f239ad803da526f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bradyajohnston/actions/runs/38695645966"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1",
      "date": "2026-10-15T07:02:46.000Z",
      "commit": "dcc567456a372cb018856062110dc914583a67ce",
      "fileid": "https://r2.ropensci.org/f0dc2cbfd006bcd835e170dd1e3f0d0dc5917019b2ba0b97a0d2ab8a5bf0b0f1",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bradyajohnston/actions/runs/38695645966"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-10-15T07:01:54.000Z",
      "commit": "dcc567456a372cb018856062110dc914583a67ce",
      "fileid": "https://r2.ropensci.org/ea8e2d36dafe89b5af62ab0ca4eeb2f578b83d40dbbcf83c5dd8bc93ef81062f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bradyajohnston/actions/runs/38695645966"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-10-15T07:01:42.000Z",
      "commit": "dcc567456a372cb018856062110dc914583a67ce",
      "fileid": "https://r2.ropensci.org/785e713bf3e168fe65d16d40e801836d90ffd211dc5a29093a82231446f86766",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bradyajohnston/actions/runs/38695645966"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-10-15T07:01:54.000Z",
      "commit": "dcc567456a372cb018856062110dc914583a67ce",
      "fileid": "https://r2.ropensci.org/8c8ddcca5dcedf83389180ce4a01b0f2e25bbccaa181d2839b25b8f4bc014581",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bradyajohnston/actions/runs/38695645966"
    }
  ]
}